Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849049.1_cds_XP_016510664.1_23474
CDS Infomation

[gene=LOC107827943] [db_xref=GeneID:107827943] [protein=putative UDP-rhamnose:rhamnosyltransferase 1] [protein_id=XP_016510664.1] [location=18085..19491] [gbkey=CDS]
Sequence

ATGGCTACCAAGAACTACCATGTGATGGTGTTCCCATGGTTAGCCTTTGGCCATATGCTA
CCTTTCCTTGAATTATCAAAGAAATTGGCAGCAAAAGGGATACGCGTTTCCTTTGTTTCC
ACCCCAAAAAACCTGCAGAGATTACCCCCTATTCCCTCAAGTTTAGGAGATAGAATAAAG
CTGCTGGAGATCCCATTGCCATCGATAGGTGGCCTGCCAGTGAATTGTGAGGCTACCGTT
GATCTTCAACCAGAGGAAATACAGTACCTGAAAAAGGCATATGACAAATTAGCCCTACCA
TTTGAAGAGTTGCTGCTTGAGAATCTGCCAGACTTGATACTGATCGACTTTGCTCCGTTC
TGGATTCCAGAAATTGCTGCTAAATATGGTGTGTCCACTGCCTTCTTTAGTGTGTACACA
GCCTCAACATTAGCTTACCTGGGATCACCTGTTGAACTTAAAAATGGCACCCTACGTACC
CGCCCTGAACATTTTGTACATCCTCCGCCTTGGTTCAACTTCCACTCTCTGGTAGCCCAC
AGGCCTGATTATGCATCAACAATGATGCATAACACTCATTGTCCTGATGCATCTGGTGTA
TCCAGTGGGCAACGTATAGCAAAAATTGTGGAGGGATGTAAATTTGTTGTAGTGAGAAGT
TGCAATGAGTTCGAAGAGAAATATATAAATCTAATTGAGGATCTTTATCAGAGACCAGTT
TTACCTATCGGCATACTTTCACCAGCACCCGAAACTGGGACTCAGCCACAAACAGATTCA
GGATGGTCTCATATTTTCAGATGGCTGGATAAACAAAAGTCCAAGTCTGTGGTATTTGTT
GGCTTCGGAAGTGAGTATAAGATGCCTAATAAGGAAATCCATGAGTTGGCTTGGGCTCTT
GAGCTTTCAGAGCAAACCTTCCTATGGATTCTGAGAAAACCAGAAGGCGTAGAGTATCAA
GAAGTATTACCTACAGGTTTTCTCTCTCGAGTATCAAACCAGGGGATTGTTAGTCTTGGT
TGGGCACCTCAACAGGATATACTAGCTCATCCTTCCATCGGAGGATGCCTTTTCCATTCT
GGTTGGGGTACCATTATTGAAGCTCTTAGCTTTGGGCACCGTCTGATTCTCATTCCGATG
GTTGCTGATCAAGGACTTAATGCAAAGCTGTTAGTGGAAAAGGAGATAGGCCACGAAGTT
CCAAGGAATGAAGACGGTTCCTTCTGCAAGGACATTGTAGCCAACTCAATAAGATTAGTG
ATGAATACCGACGAGGGAGAAAAATTGAGGTCAAGAGCTGCTCAAGTACAAAAGATTTTT
AGTGACCACAGGCTCCACGATAGTTACGTAGACCAGTTCATTCAGCACATCAAAAGGCTA
GAGTTTCAGAAGGGTAATGAAAAGTAA

Peptide Sequence

PEP ID

XP_016510664.1
PEP Infomation

PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Nicotiana tabacum]
Sequence

MATKNYHVMVFPWLAFGHMLPFLELSKKLAAKGIRVSFVSTPKNLQRLPPIPSSLGDRIK
LLEIPLPSIGGLPVNCEATVDLQPEEIQYLKKAYDKLALPFEELLLENLPDLILIDFAPF
WIPEIAAKYGVSTAFFSVYTASTLAYLGSPVELKNGTLRTRPEHFVHPPPWFNFHSLVAH
RPDYASTMMHNTHCPDASGVSSGQRIAKIVEGCKFVVVRSCNEFEEKYINLIEDLYQRPV
LPIGILSPAPETGTQPQTDSGWSHIFRWLDKQKSKSVVFVGFGSEYKMPNKEIHELAWAL
ELSEQTFLWILRKPEGVEYQEVLPTGFLSRVSNQGIVSLGWAPQQDILAHPSIGGCLFHS
GWGTIIEALSFGHRLILIPMVADQGLNAKLLVEKEIGHEVPRNEDGSFCKDIVANSIRLV
MNTDEGEKLRSRAAQVQKIFSDHRLHDSYVDQFIQHIKRLEFQKGNEK

Transcript Sequence

Gene sequence data has not been registered.